Thomas Roder

PhD candidate

• Code
• Concept

Simone Oberhänsli

Staff scientist

• Support
• Ideas
• Test data

Noam Shani

Agroscope Culture Collection

• Support

Rémy Bruggmann

Supervisor, Head of IBU

• Support
• Infrastructure

Darja Studer

Designer

• Logo design

Interfaculty Bioinformatics Unit (IBU)

University of Bern

• Infrastructure
• Funding

Agroscope

Swiss center for agricultural research

• Funding

Gebert Rüf Stiftung

Grant-ID: GRS-070/17

• Funding

GitHub Pages

Tutorials and Documentation

GitHub

Code repository

Discord

Informal chat and support

OrthoFinder

David Emms

• Orthologs
• Core Genome Alignments

GenDisCal / PaSit

Laboratory of Microbiology, Uni Gent

• Calculation of pairwise assembly similarity

DNA Features Viewer

Edinburgh Genome Foundry

• Visualize gene loci

Dot

Maria Nattestad

• Dot plots

TidyTree

CDCgov

• Visualisation of dendrograms

National Center for Biotechnology Information

NCBI

• BLAST alignment search
• Taxonomy

Blasterjs

SING Group, University of Vigo

• Visualize BLAST results

BioPython

Python library

• Parsers
• Wrappers

Huey

Python library

• Lightweight task queue

Django

Python web framework

• Web framework